Conformations of flanking bases in HIV-1 RNA DIS kissing complexes studied by Molecular Dynamics

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Authors

RÉBLOVÁ Kamila FADRNÁ Eva JOANNA Sarzynska KULINSKI Tadeusz KULHÁNEK Petr ENNIFAR Eric KOČA Jaroslav SPONER Jiri

Year of publication 2007
Type Article in Periodical
Magazine / Source Biophysical Journal
MU Faculty or unit

Faculty of Science

Citation
Field Biophysics
Keywords molecular dynamics simulations; kissing loop complexes; flanking bases; RNA
Description Flanking bases are important for formation and stability of kissing loop complexes. Extended MD study was carried out with aim to describe basic structural and dynamics properties of these bulge bases to better understand their roles.
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