On Simulating 3D Fluorescent Microscope Images

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Authors

SVOBODA David KAŠÍK Marek MAŠKA Martin HUBENÝ Jan STEJSKAL Stanislav ZIMMERMANN Michal

Year of publication 2007
Type Article in Proceedings
Conference Computer Analysis of Images and Patterns
MU Faculty or unit

Faculty of Informatics

Citation
Web http://dx.doi.org/10.1007/978-3-540-74272-2_39
Field Use of computers, robotics and its application
Keywords synthetic image; simulator; procedural texture; convolution; fluorescent optical microscope
Description In recent years many various biomedical image segmentation methods have appeared. Though typically presented to be successful the majority of them was not properly tested against ground truth images. The obvious way of testing the quality of new segmentation was based on visual inspection by a specialist in the given field. The novel 3D biomedical image data simulator is presented in this paper. It offers the results of high quality. The evaluation of generated synthetic data is compared against real image data using standard similarity techniques.
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