The SAP domain of Ku facilitates its efficient loading onto DNA ends

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Authors

FULNEČEK Jaroslav KLIMENTOVÁ Eva CAIRO CALZADA Albert BUKOVČÁKOVÁ Soňa ALEXIOU Panagiotis PROKOP Zbyněk ŘÍHA Karel

Year of publication 2023
Type Article in Periodical
Magazine / Source Nucleic Acids Research
MU Faculty or unit

Central European Institute of Technology

Citation
web https://academic.oup.com/nar/article/51/21/11706/7321075?login=true
Doi http://dx.doi.org/10.1093/nar/gkad850
Keywords STRAND BREAK REPAIR; TELOMERE LENGTH; ARABIDOPSIS; HETERODIMER; HYPERSENSITIVITY; PROTECTION; PATHWAYS; MUTANTS; FUSIONS; RNA
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Description The evolutionarily conserved DNA repair complex Ku serves as the primary sensor of free DNA ends in eukaryotic cells. Its rapid association with DNA ends is crucial for several cellular processes, including non-homologous end joining (NHEJ) DNA repair and telomere protection. In this study, we conducted a transient kinetic analysis to investigate the impact of the SAP domain on individual phases of the Ku-DNA interaction. Specifically, we examined the initial binding, the subsequent docking of Ku onto DNA, and sliding of Ku along DNA. Our findings revealed that the C-terminal SAP domain of Ku70 facilitates the initial phases of the Ku-DNA interaction but does not affect the sliding process. This suggests that the SAP domain may either establish the first interactions with DNA, or stabilize these initial interactions during loading. To assess the biological role of the SAP domain, we generated Arabidopsis plants expressing Ku lacking the SAP domain. Intriguingly, despite the decreased efficiency of the Delta SAP Ku complex in loading onto DNA, the mutant plants exhibited full proficiency in classical NHEJ and telomere maintenance. This indicates that the speed with which Ku loads onto telomeres or DNA double-strand breaks is not the decisive factor in stabilizing these DNA structures.
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