Project information
Biomolecular centre
- Project Identification
- LC06030
- Project Period
- 3/2006 - 12/2011
- Investor / Pogramme / Project type
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Ministry of Education, Youth and Sports of the CR
- Basic Research Center
- MU Faculty or unit
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Central European Institute of Technology
- prof. RNDr. Vladimír Sklenář, DrSc.
- Keywords
- Cancer drugs, biosensors, lectins, molecular modeling of biomolecules, biomolecular NMR
- Cooperating Organization
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Institute of Biophysics
- Responsible person prof. RNDr. Jiří Šponer, DrSc.
- Responsible person doc. RNDr. Ivan Rychlík, Ph.D.
The main goal of the project is to elevate the structural biology in the Czech Republic from studies of individual biomacromolecules to investigations of their complexes. This goal will be achieved by implementation of up-to-date methodology in selected scientific fields (NMR spectroscopy, computational modeling) and by focusing on problems, which are currently in the centre of interest of contemporary life sciences. Among others, key cell processes such as preservation of genome stability and DNA repair, ribosomal protein synthesis, or information transfer by recognition (lectins) will be studied. Selected research projects will lead eventually to bioanalytical (biosensors) and biomedical (vaccines, chemotherapeutics) outcomes with potential applications in research and development. To reach the outlined goals, active collaboration of participating institutions is inevitable. A number of projects will require also a broad international collaboration.
Results
The main goal of the project is to help to drive structural biology in the Czech Republic from studies on single biomacromolecules to studies on biomacromolecular complexes. To achieve the goal, we will implement recent advances in selected key methods in the field (NMR spectrometry, computer modeling) and also contribute to their development. The research will be oriented not only to the structure of biomacromolecules but will also include studies of structure/function relationship. It will touch suchimportant phenomena of the cell life as keeping genome stability, DNA repair, protein synthesis in the ribosome or information transfer via recognition (lectins). Selected parts of the research will be devoted to bioanalytical (biosensors) or biomedicinal(vaccines, chemotherapeutics) projects capable of providing results with potential applications at the practical level. By solving the above scientific tasks, the team will increase its international competitiveness. At the same time, the project will
Publications
Total number of publications: 284
2010
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Biosensors for Detection of Francisella Tularensis and Diagnosis of Tularemia
Petr Skládal, Miroslav Pohanka, Eva Kupská, Bohuslav Šafář, year: 2010, number of pages: 11 s.
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Carbon-detected Experiments for Assignment of Proline Rich Proteins
Year: 2010, type: Conference abstract
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Catch-All Virtual Organizations - Solution for Heterogeneous and Disperse Grid Users Communities
Managed Grids and Cloud Systems in the Asia-Pacific Research Community, year: 2010
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Central European NMR Meeting - 25th NMR Valtice
Year: 2010, type: Conference
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Computational study of lectin-carbohydrate interactions
Year: 2010, type: Conference abstract
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Computational Study of the MutH Enzyme Reactivity
Year: 2010, type: Conference abstract
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Conformational Energies of DNA Sugar Phosphate Backbone: Reference QM Calculations and a Comparison with Density Functional Theory and Molecular Mechanics
Journal of Chemical Theory and Computation, year: 2010, volume: 6/2010, edition: 12
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Cooperativity between subunits is essential for high affinity binding of N-acetylhexosamines to dimeric soluble and dimeric cellular forms of human CD69
Biochemistry, year: 2010, volume: 49, edition: 19
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Current technological background assigned for the crystallography of proteins in National Centre for Biomolecular Research
Year: 2010, type: Conference abstract
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CV-IIL as a tool to understanding binding properties in PA-IIL lectin family
Year: 2010, type: Conference abstract