Project information
Biomolecular centre
- Project Identification
- LC06030
- Project Period
- 3/2006 - 12/2011
- Investor / Pogramme / Project type
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Ministry of Education, Youth and Sports of the CR
- Basic Research Center
- MU Faculty or unit
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Central European Institute of Technology
- prof. RNDr. Vladimír Sklenář, DrSc.
- Keywords
- Cancer drugs, biosensors, lectins, molecular modeling of biomolecules, biomolecular NMR
- Cooperating Organization
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Institute of Biophysics
- Responsible person prof. RNDr. Jiří Šponer, DrSc.
- Responsible person doc. RNDr. Ivan Rychlík, Ph.D.
The main goal of the project is to elevate the structural biology in the Czech Republic from studies of individual biomacromolecules to investigations of their complexes. This goal will be achieved by implementation of up-to-date methodology in selected scientific fields (NMR spectroscopy, computational modeling) and by focusing on problems, which are currently in the centre of interest of contemporary life sciences. Among others, key cell processes such as preservation of genome stability and DNA repair, ribosomal protein synthesis, or information transfer by recognition (lectins) will be studied. Selected research projects will lead eventually to bioanalytical (biosensors) and biomedical (vaccines, chemotherapeutics) outcomes with potential applications in research and development. To reach the outlined goals, active collaboration of participating institutions is inevitable. A number of projects will require also a broad international collaboration.
Results
The main goal of the project is to help to drive structural biology in the Czech Republic from studies on single biomacromolecules to studies on biomacromolecular complexes. To achieve the goal, we will implement recent advances in selected key methods in the field (NMR spectrometry, computer modeling) and also contribute to their development. The research will be oriented not only to the structure of biomacromolecules but will also include studies of structure/function relationship. It will touch suchimportant phenomena of the cell life as keeping genome stability, DNA repair, protein synthesis in the ribosome or information transfer via recognition (lectins). Selected parts of the research will be devoted to bioanalytical (biosensors) or biomedicinal(vaccines, chemotherapeutics) projects capable of providing results with potential applications at the practical level. By solving the above scientific tasks, the team will increase its international competitiveness. At the same time, the project will
Publications
Total number of publications: 284
2006
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Biochemical characterization of the RECQ4 protein, mutated in Rothmund-Thomson syndrome
DNA Repair, year: 2006, volume: 2, edition: 5
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Computational Chemistry Achievements within VOCE Environment
Year: 2006
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Conformational Dependence of 31P Chemical Shift Tensors
Year: 2006, type: Conference abstract
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DNA Binding and Strand Annealing Properties of the Human BRCA2 DNA Binding Domain
Year: 2006, type: R&D Presentation
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Dynamics of Protein-Ligand Interactions
Frontieres of Biomolecular NMR, year: 2006
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Evaluation of error in model-free parameters caused by asymmetric shielding tensor of base carbons in nucleic acids
XXII International Conference on MagneticResonance in Biological Systems-Abstracts, year: 2006
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Charon Extension Layer - Universal Toolkit for Grid Applications and Computational Jobs Maintenance
Year: 2006
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MD/DFT STUDY OF ENVIRONMENTAL EFFECTS ON 31P CHEMICAL SHIFT TENSORS IN B-DNA
Materials Structure in Chemistry, Biology, Physics and Technology, year: 2006, volume: 13, edition: 1
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Molecular dynamics study of major urinary protein-pheromone interactions: A structural model for ligand-induced flexibility increase
FEBS Letters, year: 2006, volume: 580, edition: 1
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Monitoring of cell adhesion and cytotoxicity effect of derivative vitamine E using a piezoelectric biosensor
The 9th World Congress on Biosensors - Delegate Manual, year: 2006